HORDB

ID: hor005561
Uniprot ID: P30973
Protein name: GnRH-associated peptide 3
Gene name: gnrh3
Organism: Oncorhynchus masou (Cherry salmon) (Masu salmon)
Family: GnRH family
Source: animal
Expression: NA
Disease: NA
Comments: NA
Taxonomy: Oncorhynchus (genus), Salmoninae (subfamily), Salmonidae (family), Salmoniformes (order), Protacanthopterygii, Euteleosteomorpha (cohort), Clupeocephala, Osteoglossocephalai, Teleostei (infraclass), Neopterygii (subclass), Actinopteri (class), Actinopterygii (superclass), Euteleostomi, Teleostomi, Gnathostomata, Vertebrata, Craniata (subphylum), Chordata (phylum), Deuterostomia, Bilateria, Eumetazoa, Metazoa (kingdom), Opisthokonta, Eukaryota (superkingdom), cellular organisms
GO MF: GO:0005179 hormone activity
GO BP: GO:0007165 signal transduction
GO CC: GO:0005576 extracellular region; GO:0005615 extracellular space

Sequence: SVGELEATIRMMDTGGVMALPEETGAHIPERLRPYDVMSKKRMPHK
Length: 46
Propeptide: MDLSSKTVVQVVMLALIAQVTFSQHWSYGWLPGGKRSVGELEATIRMMDTGGVMALPEETGAHIPERLRPYDVMSKKRMPHK
Signal peptide: MDLSSKTVVQVVMLALIAQVTFS
Modification: NA
Glycosylation: NA
Mutagenesis: NA

Structure: (PDB_ID-from https://www.rcsb.org/; AlphaFold_DB_ID-from https://alphafold.ebi.ac.uk/; hordbxxxxxx_AF2.pdb was predicted structure by AlphaFold2; hordbxxxxxx_ESM.pdb was predicted structure by ESMFold)

hor005561_AF2.pdb

hor005561_ESM.pdb

Mass:	596987	Formula:	C221H367N65O67S5
Absent amino acids:	CFNQW	Common amino acids:	EM
pI:	7.7	Basic residues:	9
Polar residues:	10	Hydrophobic residues:	11
Hydrophobicity:	-55.87	Boman Index:	-9413
Half-Life:	1.9 hour	Half-Life Yeast:	>20 hour
Half-Life E.Coli:	>10 hour	Aliphatic Index	67.83
Instability Index:	7300.43	Extinction Coefficient cystines:	1490
Absorbance 280nm:	33.11

PubMed ID: 1515027
Title: Characterization and localization of mRNA encoding the salmon-type gonadotrophin-releasing hormone precursor of the masu salmon.