General Information

  • ID:  hor004315
  • Uniprot ID:  NA
  • Protein name:  Tachykinin-related peptide
  • Gene name:  NA
  • Organism:  Litopenaeus vannamei
  • Family:  Tachykinin family
  • Source:  Animal
  • Expression:  NA
  • Disease:  NA
  • Comments:  NA
  • Taxonomy:  NA
  • GO MF:  NA
  • GO BP:  NA
  • GO CC:  NA

Sequence Information

  • Sequence:  APSGFNGMR
  • Length:  9
  • Propeptide:  NA
  • Signal peptide:  NA
  • Modification:  T8 Methionine oxidation;T9 Argnine amide
  • Glycosylation:  NA
  • Mutagenesis:  NA

Activity

  • Function:  NA
  • Mechanism:  NA
  • Cross BBB:  NA
  • Target:  NA
  • Target Unid:   NA
  • IC50:  NA
  • EC50:  NA
  • ED50:  NA
  • Kd:  NA
  • Half life:  NA

Structure

  • Disulfide bond:  NA
  • Structure ID:  NA

  • Structure: (PDB_ID-from https://www.rcsb.org/; AlphaFold_DB_ID-from https://alphafold.ebi.ac.uk/; hordbxxxxxx_AF2.pdb was predicted structure by AlphaFold2; hordbxxxxxx_ESM.pdb was predicted structure by ESMFold)
    •    hor004315_AF2.pdbhor004315_ESM.pdb

Physical Information

Mass: 107892 Formula: C39H61N13O12S
Absent amino acids: CDEHIKLQTVWY Common amino acids: G
pI: 10.55 Basic residues: 1
Polar residues: 4 Hydrophobic residues: 2
Hydrophobicity: -52.22 Boman Index: -1594
Half-Life / Aliphatic Index: 4.4 hour Aliphatic Index: 11.11
Instability Index: 2661.11 Extinction Coefficient cystines: 0
Absorbance 280nm: 0

Literature

  • PubMed ID:  19852991
  • Title:  Combining in Silico Transcriptome Mining and Biological Mass Spectrometry for Neuropeptide Discovery in the Pacific White Shrimp Litopenaeus Vannamei