HORDB

ID: hor002008
Uniprot ID: F5XVF3
Protein name: t-GnRH-6
Gene name: NA
Organism: Ciona intestinalis (Transparent sea squirt) (Ascidia intestinalis)
Family: GnRH family
Source: Animal
Expression: NA
Disease: NA
Comments: NA
Taxonomy: Ciona (genus), Cionidae (family), Phlebobranchia (order), Ascidiacea (class), Tunicata (subphylum), Chordata (phylum), Deuterostomia, Bilateria, Eumetazoa, Metazoa (kingdom), Opisthokonta, Eukaryota (superkingdom), cellular organisms
GO MF: NA
GO BP: NA
GO CC: NA

Sequence: DPLTNIM
Length: 7(81-87)
Propeptide: MKLTFLFVVLMVLYDVTTAQDDVRDVINDEDIDRAIEVLSRLQEEETNPDLTDGDQKMEDTREKYDMEGEVDGNDNKEERDPLTNIMKRFYIKVVRQYCPPGQQCLGFRGRHRWQRCTCPGRTHCQKSPGYGYECL
Signal peptide: MKLTFLFVVLMVLYDVTTA
Modification: NA
Glycosylation: NA
Mutagenesis: NA

Function: NA
Mechanism: The sequence shown here is derived from an EMBL/GenBank/DDBJ third party annotation (TPA) entry.
Cross BBB: NA
Target: NA
Target Unid: NA
IC50: NA
EC50: NA
ED50: NA
kd: NA
Half life: NA

Structure: (PDB_ID-from https://www.rcsb.org/; AlphaFold_DB_ID-from https://alphafold.ebi.ac.uk/; hordbxxxxxx_AF2.pdb was predicted structure by AlphaFold2; hordbxxxxxx_ESM.pdb was predicted structure by ESMFold)

hor002008_AF2.pdb

hor002008_ESM.pdb

Mass:	91015	Formula:	C34H58N8O12S
Absent amino acids:	ACEFGHKQRSVWY	Common amino acids:	DILMNPT
pI:	3.75	Basic residues:	0
Polar residues:	2	Hydrophobic residues:	2
Hydrophobicity:	12.86	Boman Index:	-574
Half-Life:	1.1 hour	Half-Life Yeast:	3 min
Half-Life E.Coli:	>10 hour	Aliphatic Index	111.43
Instability Index:	4987.14	Extinction Coefficient cystines:	0
Absorbance 280nm:	0

PubMed ID: 21467196
Title: Peptidomic Analysis of the Central Nervous System of the Protochordate, Ciona Intestinalis: Homologs and Prototypes of Vertebrate Peptides and Novel Peptides