HORDB

ID: hor001383
Uniprot ID: A0A423TEB2
Protein name: FMRFamide-related peptide
Gene name: NA
Organism: Penaeus vannamei (Whiteleg shrimp) (Litopenaeus vannamei)
Family: FARP (FMRFamide related peptide) family
Source: Animal
Expression: NA
Disease: NA
Comments: NA
Taxonomy: Penaeus (genus), Penaeidae (family), Penaeoidea (superfamily), Dendrobranchiata (suborder), Decapoda (order), Eucarida (superorder), Eumalacostraca (subclass), Malacostraca (class), Multicrustacea (superclass), Crustacea (subphylum), Pancrustacea, Mandibulata, Arthropoda (phylum), Panarthropoda, Ecdysozoa, Protostomia, Bilateria, Eumetazoa, Metazoa (kingdom), Opisthokonta, Eukaryota (superkingdom), cellular organisms
GO MF: NA
GO BP: GO:0007218 neuropeptide signaling pathway
GO CC: GO:0005576 extracellular region

Sequence: APERNFLRF
Length: 9(282-290)
Propeptide: MFFAVWTLIAVITCSHYARSSPVPPVVGALEPSSQDFAQGQDDAFASPDKRLLKFGRGDEKRGDRNFLRFGRGDAAMDKRNRNFLRFGRGPNRNYIRFGRSDLAPLEFGLGLPEEELPVIIDHGDIDEMFEAFKQEKKNARNSIRHRRSVDRQLSSFCDNCDDSQKPQQTTTAQPAAHPAAAVAAVTRPKRSEAEAKDALSLQRSKRYVVPNYYGYSSYSMNHSPAAWAKMIPAEDLELEEEPQVLSKRAFNVLS
Signal peptide: MFFAVWTLIAVITCSHYARS
Modification: NA
Glycosylation: NA
Mutagenesis: NA

Structure: (PDB_ID-from https://www.rcsb.org/; AlphaFold_DB_ID-from https://alphafold.ebi.ac.uk/; hordbxxxxxx_AF2.pdb was predicted structure by AlphaFold2; hordbxxxxxx_ESM.pdb was predicted structure by ESMFold)

hor001383_AF2.pdb

hor001383_ESM.pdb

Mass:	129218	Formula:	C53H80N16O13
Absent amino acids:	CDGHIKMQSTVWY	Common amino acids:	FR
pI:	10.4	Basic residues:	2
Polar residues:	1	Hydrophobic residues:	4
Hydrophobicity:	-71.11	Boman Index:	-3060
Half-Life:	4.4 hour	Half-Life Yeast:	>20 hour
Half-Life E.Coli:	>10 hour	Aliphatic Index	54.44
Instability Index:	6801.11	Extinction Coefficient cystines:	0
Absorbance 280nm:	0

PubMed ID: 19852991
Title: Combining in Silico Transcriptome Mining and Biological Mass Spectrometry for Neuropeptide Discovery in the Pacific White Shrimp Litopenaeus Vannamei